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Watterson, Steven Dr

Lecturer in Computational Biology (Hypertension)

Watterson, Steven Dr

space

Dr Steven Watterson
Lecturer in Computational Biology (Hypertension)
Biomedical Sciences Research Institute

space

School of Biomedical Sciences
University of Ulster
Coleraine campus
Cromore Road
Coleraine
Co. Londonderry
BT52 1SA

phone: + 's.watterson'
Email: s.watterson@ulster.ac.uk

Watterson, Steven Dr - Publications

Number of items: 37.

Watterson, Steven (2013) Oxysterol metabolism and regulation presented as a SBGN diagram. . 6 pp, DOI: 10.6084/m9.figshare.97449

Watterson, Steven (2013) The synthesis of Androgen and Estrogen from cholesterol presented as a SBGN diagram. 5 pp, DOI: 10.6084/m9.figshare.97317

Watterson, Steven (2013) Transcription factors of Interleukin-1β (IL-1β) are important for enhancer of Human Immunodeficiency Virus Type 1 Long Terminal Repeat sequence (HIV-1 LTR). Figshare, 14 pp, DOI: 10.6084/m9.figshare.776915

Watterson, Steven (2013) Common transcription factors between Hepatitis B virus (HBV) and Interleukin-8 (IL-8). Figshare, 10 pp, DOI: 10.6084/m9.figshare.776903

Watterson, Steven (2013) Logic based mapping of promoter enhancer regions of HPV16 and Interferon-γ: a search for similarity. . Figshare, 17 pp, DOI: 10.6084/m9.figshare.753326

Watterson, Steven (2013) Examining common transcription factors and functional sequences that might indicate viral mimicry between the activation of Human Papilloma Virus-18 proteins E6 and E7 and the innate immune genes IRF1 and IL12. 7 pp, DOI: http://dx.doi.org/10.6084/m9.figshare.753078

Watterson, Steven (2013) Investigating a novel kind of molecular mimicry using pathway mapping based approaches, in particular for IFNγ, SV40 and Adenovirus. . 6 pp, DOI: 10.6084/m9.figshare.748790

Watterson, Steven (2013) Mapping innate immune host and viral gene interactions in monocytes/macrophages, in particular for IL1β and the LTR region of HIV-1. Figshare, 8 pp, DOI: 10.6084/m9.figshare.741713

Watterson, Steven (2013) Transcriptional regulation of viral and innate immune genes – a comparison of IFNbeta and HCMV MIE genes. Figshare, 10 pp, DOI: 10.6084/m9.figshare.703089

Watterson, Steven (2013) Exploring possible mimicry of host immune genes by viruses. 10 pp, DOI: 10.6084/m9.figshare.703130

Watterson, Steven (2013) The Transcription Factor STAT-1 Couples Macrophage Synthesis of 25-Hydroxycholesterol to the Interferon Antiviral Response. Immunity, 38 (1). pp. 106-118.

Watterson, Steven (2013) A model of flux regulation in the cholesterol biosynthesis pathway: Immune mediated graduated flux reduction versus statin-like led stepped flux reduction. Biochimie, 95. pp. 613-21.

Watterson, Steven (2013) A comprehensive, machine readable view of the mammalian cholesterol biosynthesis pathway (in press). Biochemical Pharmacology, 86 (1). pp. 56-66.

Watterson, Steven (2013) A Systems Pathway View of Cytomegalovirus Infection. In: Cytomegaloviruses: From Molecular Pathogenesis to Intervention. Caister Academic Press, Institute for Virology, University Medical Center of the Johannes Gutenberg-University, 55131 Mainz, Germany, pp. 1-1000000. ISBN 978-1-908230-18-8

Watterson, Steven (2012) Regulation of HMGCR in the mevalonte pathway. 4 pp, DOI: 10.6084/m9.figshare.105160

Watterson, Steven (2012) The Vitamin D3 Synthesis Pathway. 8 pp, DOI: 10.6084/m9.figshare.105162

Blanc, Mathieu, Hsieh, Wei Yuan, Robertson, Kevin A, Kai, Kropp A, Forster, Thorsten, Shui, Guanghou, Lacaze, Paul, Watterson, Steven, Griffiths, Samantha J, Spann, Nathanael J, Meljon, Anna, Talbot, Simon, Krishnan, Kathiresan, Covey, Douglas F, Wenk, Markus R, Craigon, Marie, Ruzsics, Zsolts, Haas, Jurgen, Angulo, Ana, Griffiths, William J, Glass, Christopher K, Wang, Yuqin and Ghazal, Peter (2012) The Transcription Factor STAT-1 Couples Macrophage Synthesis of 25-Hydroxycholesterol to the Interferon Antiviral Response. Immunity, 38 (1). pp. 106-118.

Watterson, Steven and Parton, Andrew (2012) Digital clocks: simple Boolean models can quantitatively describe circadian systems.. J R Soc Interface, 9 (74). pp. 2365-2382.

Watterson, Steven (2011) Regulation and feedback of cholesterol metabolism. Nature Precedings 12 pp, DOI: http://dx.doi.org/10.1038/npre.2011.6315.1

Blanc, Mathieu, Hsieh, Wayne, Robertson, Kevin A, Watterson, Steven, Shui, Guanghou, Lacaze, Paul, Khondoker, Mizanur, Dickinson, Paul, Sing, Garwin, Rodriguez-Martin, Sara, Phelan, Peter, Forster, Thorsten, Strobl, Birgit, Muller, Matthias, Riemersma, Rudolph, Osborne, Timothy, Wenk, Markus R, Angulo, Ana and Ghazal, Peter (2011) Host defense against viral infection involves interferon mediated down-regulation of sterol biosynthesis. PLoS Biology, 9 (3). pp. e1000598.

Watterson, Steven (2011) The in silico macrophage: toward a better understanding of inflammatory disease. Genome Medicine, 3 (4).

Watterson, Steven (2011) Translation from the Quantified Implicit Process Flow Abstraction in SBGN-PD Diagrams to Bio-PEPA Illustrated on the Cholesterol Pathway. Trans. on Comput. Syst. Biol. XIII (C. Priami et al. Eds.), LNBI (Springer), 6575. pp. 13-38.

Watterson, Steven (2011) Host defense against viral infection involves interferon mediated down-regulation of sterol biosynthesis. PLoS Biology, 9 (3). pp. e1000598.

Watterson, Steven (2010) Construction of a large scale integrated map of macrophage pathogen recognition and effector systems. BMC Systems Biology, 4 (63).

Watterson, Steven (2010) Use of logic theory in understanding regulatory pathway signaling in response to infection. Future Microbiology, 5 (2). pp. 163-176.

Raza, Sobia, McDerment, Neil, Lacaze, Paul A, Robertson, Kevin, Watterson, Steven, Chen, Ying, Chisholm, Michael, Eleftheriadis, George, Monk, Stephanie, O'Sullivan, Maire, Turnbull, Arran, Roy, Douglas, Theocharidis, Athanasios, Ghazal, Peter and Freeman, Tom C (2010) Construction of a large scale integrated map of macrophage pathogen recognition and effector systems. BMC Systems Biology, 4 (1). pp. 63.

Watterson, Steven (2010) Transcriptional complex assemblyrepresented in SBGN PD. Nature Precedings 1 pp, DOI: doi:10.1038/npre.2010.4984.1

Watterson, Steven (2009) The Systems Biology Graphical Notation. Nature Biotechnology, 27. pp. 735-741.

Novere, Nicolas Le, Hucka, Michael, Mi, Huaiyu, Moodie, Stuart, Schreiber, Falk, Sorokin, Anatoly, Demir, Emek, Wegner, Katja, Aladjem, Mirit, Wimalaratne, Sarala, Bergman, Frank, Gauges, Ralph, Ghazal, Peter, Kawaji, Hideya, Li, Lu, Matsuoka, Yukiko, Villeger, Alice, Boyd, Sarah, Calzone, Laurence, Courtot, Melanie, Dogrusoz, Ugur, Freeman, Tom, Funahashi, Akira, Ghosh, Samik, Jouraku, Akiya, Kim, Sohyoung, Kolpakov, Fedor, Luna, Augustin, Sahle, Sven, Schmidt, Esther, Watterson, Steven, Wu, Guanming, Goryanin, Igor, Kell, Douglas, Sander, Chris, Sauro, Herbert, Snoep, Jacky, Kohn, Kurt and Kitano, Hiroaki (2009) The Systems Biology Graphical Notation. Nature Biotechnology, 27. pp. 735-741.

Watterson, Steven (2009) Inference of transition probabilities between the attractors in Boolean networks with perturbation. In: Genomic Signal Processing and Statistics, 2009. GENSIPS 2009. IEEE International Workshop. IEEE.

Watterson, Steven (2008) The chiral and flavour projection of Dirac-Kahler fermions in the geometric discretization. International Journal of Geometric Methods in Modern Physics, 5 (3). pp. 1-18.

Watterson, Steven (2008) Logic models of pathway biology. Drug Discovery Today, 13 (9/10). pp. 447-456.

Watterson, Steven (2008) Inferring Boolean Networks with perturbation from sparse gene expression data: a general model applied to the Interferon regulatory network. Molecular BioSystems, 4. pp. 1024 - 30.

Watterson, Steven (2007) The Flavour projection of staggered fermions and the quarter-root trick.. Journal of High Energy Physics, 2007 (06). pp. 048.

Watterson, Steven (2007) The flavour projection of staggered fermions and the quarter-root trick. Journal of High Energy Physics, 06.

Watterson, Steven (2005) Distributing the chiral and flavor components of Dirac-Kahler fermions across multiple lattices.. In: Proceedings of 23rd International Symposium on Lattice Field Field: Lattice 2005, Trinity College, Dublin, Ireland, 25-30 Jul 2005., Dublin, Ireland. Proceedings of Science.

Watterson, Steven (2000) Free Energy Changes During Non-Equilibrium System Transformations and Their Experimental Validation. Los Alamos National Laboratory. 10 pp.

This list was generated on Fri Nov 28 14:25:53 2014 GMT.